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Functions
ref_sequence
mut_sequence
track
genotype
samples
in_table
other functions
Vtools report
avg_depth
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plot_association
Customization
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Models
Peng2014_ex1
Peng2014_ex2
Format
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rsname
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tped
map
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md5sumd
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Multivariate
collapsing
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SKAT test
MetaSKAT
VAT stacking
Create your test!
running R programs
programming in VAT
View association result
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Github repo
ScriptOfScripts
bpeng@mdanderson.org
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Application
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Association
> Multivariate
Multivariate
Multivariate
Multivariate
Introduction
Collapsing methods
Aggregation methods
Weighted methods
Variable Thresholds
SKAT test