Database of genomic variants is a curated catalogue of human genomic structural variation. It is a range-based database that shows the range of such variants.
% vtools show annotation DGV -v2
Annotation database DGV (version hg19_20130723)
Description: Database of Genomic Variants, a curated catalogue of
human genomic structural variation.
Database type: range
Number of records: 202,430
Distinct ranges: 199,827
Reference genome hg19: chr, start, end
Field: variantaccession
Type: string
Missing entries: 0
Unique Entries: 202,430
Field: chr
Type: string
Missing entries: 0
Unique Entries: 24
Field: start
Type: integer
Missing entries: 0
Unique Entries: 189,925
Range: 1 - 249205967
Field: end
Type: integer
Missing entries: 0
Unique Entries: 189,604
Range: 16629 - 249206446
Field: varianttype
Type: string
Missing entries: 0
Unique Entries: 2
Field: variantsubtype
Type: string
Missing entries: 0
Unique Entries: 9
Field: reference
Type: string
Missing entries: 0
Unique Entries: 55
Field: pubmedid
Type: integer
Missing entries: 0
Unique Entries: 55
Range: 12058347 - 23290073
Field: method
Type: string
Missing entries: 0
Unique Entries: 31
Field: platform
Type: string
Missing entries: 0
Unique Entries: 49
Field: mergedvariants
Type: string
Missing entries: 0
Unique Entries: 1
Field: supportingvariants
Type: string
Missing entries: 0
Unique Entries: 198,642
Field: mergedorsample
Type: string
Missing entries: 0
Unique Entries: 2
Field: frequency
Type: string
Missing entries: 0
Unique Entries: 65
Field: samplesize
Type: integer
Missing entries: 0
Unique Entries: 37
Range: 0 - 6533
Field: observedgains
Type: integer
Missing entries: 0
Unique Entries: 188
Range: 0 -
Field: observedlosses
Type: integer
Missing entries: 0
Unique Entries: 825
Range: 0 -
Field: cohortdescription
Type: string
Missing entries: 0
Unique Entries: 6
Field: genes
Type: string
Missing entries: 0
Unique Entries: 25,687
Field: samples
Type: string
Missing entries: 0
Unique Entries: 67,200